Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015796795.1_cds_XP_016451774.1_4547
CDS Infomation

[gene=LOC107776395] [db_xref=GeneID:107776395] [protein=probable E3 ubiquitin-protein ligase ARI8] [protein_id=XP_016451774.1] [location=48063..49601] [gbkey=CDS]
Sequence

ATGGAGTCCGACGGCGACATGTACGAGGATAGTGACGTAGAATCCGCCGGCGATGATTAC
TACGGCGATGGAGACGCTGCCGACGACGTCAGCGCCGCCGATGACGACGACTTCATCGGT
AATATTGATTCTGATGACTCTGATGATCTTTGCGCTAAGAAAAACTATGTCGTTTTGTCC
GACGATGATATTCGTCGTCTCATGGACGATGATATCTCTAAGGTTTTCTCAGTTCTCTCA
ATTTCCAAAACTGAAGCATCTGCTTTGCTCCGACGGTATAATTGGAGTGTGAGTAAAGTT
CACGAGGAGTGGTTCGCCGATGAATCGAAAGTTCGAGAAGCTATTGGCTTGAAAATAAAT
AATAAAACCATTCAATTTCCGGAATTGAATTCAGTAGTTTGTGTAATTTGCTTTGAGGAT
TATTCATCCGATGGAATTTTGGCGTCTGCTTGTGGTCATCCTTTCTGTGTTGAATGTTGG
CGAGGGTATATTAGTAATTCCATAGCTGATGGTTCTGGATGTTTGAATTTACGATGTCCT
GAACCGTCTTGTAAAGTTGCTGTCACACAAGATATGATCGATCTTTTAGCGTCCGATATT
GATAAAAAGAAGTATTATGGATTTCTTTTTCGTTCTTACGTTGAGCAAAACAGGAAAATT
AAATGGTGTCCTGCTCCGGGATGTAATTTCGCCGTTGAATTTGATATAGGGAGTGATAAT
TGCGATGTTATGTGTAACTGTTCACATTATTTTTGTTGGTATTGTACGGATGAAGCTCAT
CGACCCGTTGATTGTGAAACAGTGAGCAAATGGAAGGAGAAGAACAGAGCAGAATCGGAA
AATACGAATTGGATTTTGGCTTACACAAAACCTTGTCCCAAATGCAAACGCCCAATTGAG
AAGAACGAAGGGTGTATGAGAATGACTTGTAGAAACCCTTGCAACTATCAATTCTGTTGG
CTGTGTCTTAATTCTTGGGAAATTCACGGGTATAATCCGTGTAACAAGTACAAGCCGGGG
AATGAAGATGAGAAAAAGAAAGAAATGGCAAAGCAATCTATTGTGAAATACACGCATTAT
TACGAGAGATGGGCGGCAAATGAGAAGTCGAGGCGAAAGGCCGTAGAGGATTTGAAGAGA
ATGGATGAGGTGAATGTTAAGGAACTGAGTATATTGCAGAGAATACCAGAGACACAATTG
AAGTTCATTTTAGATGCTTGGAATCAGATTGTTGAGTGCAGGAGAGTGTTGAAATGGACT
TATGCTTATGGATTTTACTTGCCTAATGAGGAGAAAACGAAAAGGCAGTTTTTCGAGTAC
TTGCAAGGTCAGGCTGAGGTTGGTTTGGAGAGACTTCACCATTGTGCAGAGAAGGAACTG
GAGATTTATTTGAATGTTGAAGAAAGTGATTCGAGAACATTTTATGATTTTCGTAGAAAG
CTTACTGGTTTGACCACTGTGACTAAGAATTACTTTGAGAATTTAGTTAGAGCACTTGAG
AATGGTCTTGAAGATGTGCATTCTCTTAATGCAAAATAA

Peptide Sequence

PEP ID

XP_016451774.1
PEP Infomation

PREDICTED: probable E3 ubiquitin-protein ligase ARI8 [Nicotiana tabacum]
Sequence

MESDGDMYEDSDVESAGDDYYGDGDAADDVSAADDDDFIGNIDSDDSDDLCAKKNYVVLS
DDDIRRLMDDDISKVFSVLSISKTEASALLRRYNWSVSKVHEEWFADESKVREAIGLKIN
NKTIQFPELNSVVCVICFEDYSSDGILASACGHPFCVECWRGYISNSIADGSGCLNLRCP
EPSCKVAVTQDMIDLLASDIDKKKYYGFLFRSYVEQNRKIKWCPAPGCNFAVEFDIGSDN
CDVMCNCSHYFCWYCTDEAHRPVDCETVSKWKEKNRAESENTNWILAYTKPCPKCKRPIE
KNEGCMRMTCRNPCNYQFCWLCLNSWEIHGYNPCNKYKPGNEDEKKKEMAKQSIVKYTHY
YERWAANEKSRRKAVEDLKRMDEVNVKELSILQRIPETQLKFILDAWNQIVECRRVLKWT
YAYGFYLPNEEKTKRQFFEYLQGQAEVGLERLHHCAEKELEIYLNVEESDSRTFYDFRRK
LTGLTTVTKNYFENLVRALENGLEDVHSLNAK

Transcript Sequence

Gene sequence data has not been registered.